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ZNF652 zinc finger protein 652 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101045595, updated on 8-Mar-2024

Summary

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Gene symbol
ZNF652
Gene description
zinc finger protein 652
See related
EnsemblRapid:ENSSBOG00000029507
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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See ZNF652 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100930.1 (41084211..41104178)

NW_024100930.1Genomic Context describing neighboring genes Neighboring gene prohibitin 1 Neighboring gene U7 small nuclear RNA Neighboring gene phosphoethanolamine/phosphocholine phosphatase 1 Neighboring gene ABI family member 3 Neighboring gene G protein subunit gamma transducin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100930 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: zinc finger protein 652

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100930.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    41084211..41104178
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010341870.2 → XP_010340172.2  LOW QUALITY PROTEIN: zinc finger protein 652

    UniProtKB/TrEMBL
    A0A2K6U2J7
    Related
    ENSSBOP00000046616.1, ENSSBOT00000076754.1
    Conserved Domains (4) summary
    PLN03086
    Location:242 → 306
    PLN03086; PRLI-interacting factor K; Provisional
    COG5189
    Location:439 → 490
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:389 → 409
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:457 → 481
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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