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LSM10 LSM10, U7 small nuclear RNA associated [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101043478, updated on 8-Mar-2024

Summary

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Gene symbol
LSM10
Gene description
LSM10, U7 small nuclear RNA associated
See related
EnsemblRapid:ENSSBOG00000036413
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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See LSM10 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100927.1 (52579943..52584306)

NW_024100927.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein S15 Neighboring gene organic solute carrier partner 1 Neighboring gene small nucleolar RNA SNORA63 Neighboring gene serine/threonine kinase 40 Neighboring gene collagen alpha-1(III) chain-like Neighboring gene eva-1 homolog B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100927 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables U7 snRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone pre-mRNA DCP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA 3'-end processing by stem-loop binding and cleavage IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytoplasmic U snRNP body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
U7 snRNA-associated Sm-like protein LSm10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100927.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    52579943..52584306
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003937498.1 → XP_003937547.1  U7 snRNA-associated Sm-like protein LSm10

    See identical proteins and their annotated locations for XP_003937547.1

    UniProtKB/TrEMBL
    A0A2K6V950
    Related
    ENSSBOP00000040690.1, ENSSBOT00000057728.2
    Conserved Domains (1) summary
    cd01733
    Location:8 → 85
    LSm10; Like-Sm protein 10
Nucleotide Protein
Heading Accession and Version

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