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ZFP1 ZFP1 zinc finger protein [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101042231, updated on 8-Mar-2024

Summary

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Gene symbol
ZFP1
Gene description
ZFP1 zinc finger protein
See related
EnsemblRapid:ENSSBOG00000020206
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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See ZFP1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100918.1 (464356..507300, complement)

NW_024100918.1Genomic Context describing neighboring genes Neighboring gene chymotrypsinogen B2 Neighboring gene chymotrypsinogen B Neighboring gene RNA guanine-N7 methyltransferase activating subunit-like Neighboring gene lactate dehydrogenase D Neighboring gene zinc and ring finger 1 Neighboring gene dnaJ homolog subfamily A member 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100918 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100918.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    464356..507300 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039463557.1 → XP_039319491.1  zinc finger protein 1 homolog isoform X2

    Related
    ENSSBOP00000006501.2, ENSSBOT00000023245.2
    Conserved Domains (4) summary
    COG5048
    Location:266 → 402
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:326 → 346
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:7 → 47
    KRAB; KRAB box
    pfam13465
    Location:226 → 251
    zf-H2C2_2; Zinc-finger double domain

  2. XM_003939908.2 → XP_003939957.2  zinc finger protein 1 homolog isoform X2

    Conserved Domains (4) summary
    COG5048
    Location:266 → 402
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:326 → 346
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:7 → 47
    KRAB; KRAB box
    pfam13465
    Location:226 → 251
    zf-H2C2_2; Zinc-finger double domain

  3. XM_010350619.2 → XP_010348921.2  zinc finger protein 1 homolog isoform X1

    Conserved Domains (4) summary
    COG5048
    Location:269 → 405
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:329 → 349
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:10 → 50
    KRAB; KRAB box
    pfam13465
    Location:229 → 254
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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