U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SC5D sterol-C5-desaturase [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101038292, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SC5D
Gene description
sterol-C5-desaturase
See related
EnsemblRapid:ENSSBOG00000020424
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Also known as
SC5DL
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SC5D in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100923.1 (26033584..26053585)

NW_024100923.1Genomic Context describing neighboring genes Neighboring gene glutamate ionotropic receptor kainate type subunit 4 Neighboring gene uncharacterized LOC120364702 Neighboring gene tubulin-specific chaperone cofactor E-like protein Neighboring gene zinc finger protein 574-like Neighboring gene vitamin K epoxide reductase complex subunit 1-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_024100923 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol biosynthetic process via lathosterol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
lathosterol oxidase
Names
sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100923.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    26033584..26053585
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003923584.3 → XP_003923633.1  lathosterol oxidase

    See identical proteins and their annotated locations for XP_003923633.1

    UniProtKB/TrEMBL
    A0A2K6SHP1
    Related
    ENSSBOP00000006904.1, ENSSBOT00000023656.2
    Conserved Domains (2) summary
    COG3000
    Location:42 → 257
    ERG3; Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]
    pfam04116
    Location:123 → 253
    FA_hydroxylase; Fatty acid hydroxylase superfamily

  2. XM_010334422.2 → XP_010332724.1  lathosterol oxidase

    See identical proteins and their annotated locations for XP_010332724.1

    UniProtKB/TrEMBL
    A0A2K6SHP1
    Conserved Domains (2) summary
    COG3000
    Location:42 → 257
    ERG3; Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]
    pfam04116
    Location:123 → 253
    FA_hydroxylase; Fatty acid hydroxylase superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.