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TRPV3 transient receptor potential cation channel subfamily V member 3 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101038041, updated on 8-Mar-2024

Summary

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Gene symbol
TRPV3
Gene description
transient receptor potential cation channel subfamily V member 3
See related
EnsemblRapid:ENSSBOG00000035972
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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See TRPV3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100930.1 (22364990..22403368, complement)

NW_024100930.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 1E5 Neighboring gene spermatogenesis associated 22 Neighboring gene aspartoacylase Neighboring gene transient receptor potential cation channel subfamily V member 1 Neighboring gene sedoheptulokinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100930 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transient receptor potential cation channel subfamily V member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100930.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    22364990..22403368 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010343658.2 → XP_010341960.1  transient receptor potential cation channel subfamily V member 3

    UniProtKB/TrEMBL
    A0A2K6V6Z6
    Related
    ENSSBOP00000039927.2, ENSSBOT00000056891.2
    Conserved Domains (4) summary
    cd00204
    Location:213 → 361
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam00520
    Location:517 → 689
    Ion_trans; Ion transport protein
    pfam12796
    Location:172 → 293
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:214 → 245
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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