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ASIC3 acid sensing ion channel subunit 3 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101036863, updated on 8-Mar-2024

Summary

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Gene symbol
ASIC3
Gene description
acid sensing ion channel subunit 3
See related
EnsemblRapid:ENSSBOG00000029616
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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See ASIC3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100925.1 (90537892..90543751)

NW_024100925.1Genomic Context describing neighboring genes Neighboring gene autophagy related 9B Neighboring gene ATP binding cassette subfamily B member 8 Neighboring gene cyclin dependent kinase 5 Neighboring gene solute carrier family 4 member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100925 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acid-sensing ion channel 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100925.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    90537892..90543751
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010340480.2 → XP_010338782.1  acid-sensing ion channel 3 isoform X1

    UniProtKB/TrEMBL
    A0A2K6U380
    Conserved Domains (1) summary
    cl02990
    Location:20 → 573
    ASC; Amiloride-sensitive sodium channel

  2. XM_010340482.2 → XP_010338784.1  acid-sensing ion channel 3 isoform X2

    UniProtKB/TrEMBL
    A0A2K6U380
    Conserved Domains (1) summary
    cl02990
    Location:20 → 504
    ASC; Amiloride-sensitive sodium channel

  3. XM_003929868.3 → XP_003929917.1  acid-sensing ion channel 3 isoform X3

    UniProtKB/TrEMBL
    A0A2K6U380, A0A2K6U396
    Related
    ENSSBOP00000026360.2, ENSSBOT00000043234.2
    Conserved Domains (1) summary
    cl02990
    Location:20 → 523
    ASC; Amiloride-sensitive sodium channel

  4. XM_039472721.1 → XP_039328655.1  acid-sensing ion channel 3 isoform X4

    Conserved Domains (1) summary
    cl02990
    Location:20 → 484
    ASC; Amiloride-sensitive sodium channel
Nucleotide Protein
Heading Accession and Version

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