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POFUT1 protein O-fucosyltransferase 1 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101034543, updated on 8-Mar-2024

Summary

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Gene symbol
POFUT1
Gene description
protein O-fucosyltransferase 1
See related
EnsemblRapid:ENSSBOG00000023478
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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See POFUT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100935.1 (24960561..24988753)

NW_024100935.1Genomic Context describing neighboring genes Neighboring gene putative testis-specific Y-encoded-like protein 3 Neighboring gene PLAG1 like zinc finger 2 Neighboring gene kinesin family member 3B Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100935 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose protein O-fucosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100935.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    24960561..24988753
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003932073.3 → XP_003932122.1  GDP-fucose protein O-fucosyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A2K6T1F5
    Related
    ENSSBOP00000013443.1, ENSSBOT00000030237.2
    Conserved Domains (2) summary
    cd11302
    Location:30 → 379
    O-FucT-1; GDP-fucose protein O-fucosyltransferase 1
    pfam10250
    Location:40 → 372
    O-FucT; GDP-fucose protein O-fucosyltransferase

  2. XM_010342708.2 → XP_010341010.1  GDP-fucose protein O-fucosyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A2K6T1D5
    Related
    ENSSBOP00000013449.1, ENSSBOT00000030243.2
    Conserved Domains (1) summary
    cl16914
    Location:30 → 181
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins
Nucleotide Protein
Heading Accession and Version

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