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LOC101030530 small nuclear ribonucleoprotein-associated protein N-like [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101030530, updated on 16-Nov-2023

Summary

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Gene symbol
LOC101030530
Gene description
small nuclear ribonucleoprotein-associated protein N-like
See related
EnsemblRapid:ENSSBOG00000020945
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
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Genomic context

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See LOC101030530 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100920.1 (25527722..25528685, complement)

NW_024100920.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent RNA helicase DDX3X-like Neighboring gene RNA-binding protein 3-like Neighboring gene 60S ribosomal protein L35a-like Neighboring gene centromere protein E

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100920 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U1 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U2 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U2-type prespliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U4 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U4/U6 x U5 tri-snRNP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U5 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small nuclear ribonucleoprotein-associated protein N-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100920.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    25527722..25528685 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039468538.1 → XP_039324472.1  small nuclear ribonucleoprotein-associated protein N-like isoform X1

    UniProtKB/TrEMBL
    A0A2K6TA22
    Related
    ENSSBOP00000008052.2, ENSSBOT00000024810.2
    Conserved Domains (1) summary
    cd01717
    Location:5 → 83
    Sm_B; Sm protein B

  2. XM_039468539.1 → XP_039324473.1  small nuclear ribonucleoprotein-associated protein N-like isoform X2

    UniProtKB/TrEMBL
    A0A2K6TA22
    Conserved Domains (1) summary
    cd01717
    Location:5 → 83
    Sm_B; Sm protein B
Nucleotide Protein
Heading Accession and Version

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