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PCBP4 poly(rC) binding protein 4 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101028221, updated on 8-Mar-2024

Summary

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Gene symbol
PCBP4
Gene description
poly(rC) binding protein 4
See related
EnsemblRapid:ENSSBOG00000027029
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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See PCBP4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100931.1 (9612177..9622295)

NW_024100931.1Genomic Context describing neighboring genes Neighboring gene aminoacylase-1 Neighboring gene abhydrolase domain containing 14A Neighboring gene abhydrolase domain containing 14B Neighboring gene G protein-coupled receptor 62 Neighboring gene poly(ADP-ribose) polymerase family member 3 Neighboring gene ribosomal RNA processing 9, U3 small nucleolar RNA binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100931 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
poly(rC)-binding protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100931.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    9612177..9622295
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039477235.1 → XP_039333169.1  poly(rC)-binding protein 4

    UniProtKB/TrEMBL
    A0A2K6TNE1, A0A2K6TNK3
    Related
    ENSSBOP00000021214.2, ENSSBOT00000038050.2
    Conserved Domains (3) summary
    cd22517
    Location:17 → 86
    KH-I_PCBP4_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
    cd22520
    Location:101 → 172
    KH-I_PCBP4_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
    cd22523
    Location:241 → 308
    KH-I_PCBP4_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins

  2. XM_039477236.1 → XP_039333170.1  poly(rC)-binding protein 4

    UniProtKB/TrEMBL
    A0A2K6TNE1, A0A2K6TNK3
    Conserved Domains (3) summary
    cd22517
    Location:17 → 86
    KH-I_PCBP4_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
    cd22520
    Location:101 → 172
    KH-I_PCBP4_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
    cd22523
    Location:241 → 308
    KH-I_PCBP4_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
Nucleotide Protein
Heading Accession and Version

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