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DDX42 DEAD-box helicase 42 [ Papio anubis (olive baboon) ]

Gene ID: 101026169, updated on 8-Mar-2024

Summary

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Gene symbol
DDX42
Gene description
DEAD-box helicase 42
See related
Ensembl:ENSPANG00000020990
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See DDX42 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
19
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 17 NC_044992.1 (55954319..56001516)
103 previous assembly Panu_3.0 (GCF_000264685.3) 16 NC_018167.2 (55879261..55926149)

Chromosome 17 - NC_044992.1Genomic Context describing neighboring genes Neighboring gene STE20 related adaptor alpha Neighboring gene coiled-coil domain containing 47 Neighboring gene FtsJ RNA 2'-O-methyltransferase 3 Neighboring gene proteasome 26S subunit, ATPase 5 Neighboring gene SWI/SNF related BAF chromatin remodeling complex subunit D2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase DDX42
Names
DEAD (Asp-Glu-Ala-Asp) box polypeptide 42

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044992.1 Reference Panubis1.0 Primary Assembly

    Range
    55954319..56001516
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031657675.1 → XP_031513535.1  ATP-dependent RNA helicase DDX42 isoform X1

    UniProtKB/TrEMBL
    A0A096P6F8
    Conserved Domains (1) summary
    PTZ00110
    Location:198 → 652
    PTZ00110; helicase; Provisional

  2. XM_003913274.3 → XP_003913323.1  ATP-dependent RNA helicase DDX42 isoform X1

    UniProtKB/TrEMBL
    A0A096P6F8
    Related
    ENSPANP00000020933.1, ENSPANT00000012235.3
    Conserved Domains (1) summary
    PTZ00110
    Location:198 → 652
    PTZ00110; helicase; Provisional

  3. XM_017950865.1 → XP_017806354.1  ATP-dependent RNA helicase DDX42 isoform X2

Nucleotide Protein
Heading Accession and Version

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