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MTREX Mtr4 exosome RNA helicase [ Papio anubis (olive baboon) ]

Gene ID: 101024675, updated on 8-Mar-2024

Summary

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Gene symbol
MTREX
Gene description
Mtr4 exosome RNA helicase
See related
Ensembl:ENSPANG00000009697
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Also known as
SKIV2L2
Orthologs
human mouse all
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Genomic context

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See MTREX in Genome Data Viewer
Location:
chromosome: 5
Exon count:
28
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 5 NC_044980.1 (49849100..49973968)
103 previous assembly Panu_3.0 (GCF_000264685.3) 6 NC_018157.2 (51696409..51821125)

Chromosome 5 - NC_044980.1Genomic Context describing neighboring genes Neighboring gene cyclin O Neighboring gene DExH-box helicase 29 Neighboring gene uncharacterized LOC103885103 Neighboring gene phospholipid phosphatase 1 Neighboring gene cytochrome c oxidase subunit 7C, mitochondrial-like Neighboring gene phospholipid phosphatase 1-like Neighboring gene cytochrome c oxidase subunit 7C, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in maturation of 5.8S rRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exosome RNA helicase MTR4
Names
Ski2 like RNA helicase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044980.1 Reference Panubis1.0 Primary Assembly

    Range
    49849100..49973968
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021939365.2 → XP_021795057.2  exosome RNA helicase MTR4 isoform X1

    UniProtKB/TrEMBL
    A0A8I5N3I5
    Related
    ENSPANP00000053297.1, ENSPANT00000082584.1
    Conserved Domains (1) summary
    COG4581
    Location:68 → 1008
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]

  2. XM_003899677.5 → XP_003899726.2  exosome RNA helicase MTR4 isoform X2

    UniProtKB/TrEMBL
    A0A096MNY0, A0A2I3MX79
    Related
    ENSPANP00000001404.2, ENSPANT00000005970.3
    Conserved Domains (1) summary
    COG4581
    Location:68 → 1042
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
Nucleotide Protein
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