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PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 [ Papio anubis (olive baboon) ]

Gene ID: 101023833, updated on 8-Mar-2024

Summary

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Gene symbol
PAFAH1B1
Gene description
platelet activating factor acetylhydrolase 1b regulatory subunit 1
See related
Ensembl:ENSPANG00000024454
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See PAFAH1B1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
11
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 17 NC_044992.1 (2309670..2417873)
103 previous assembly Panu_3.0 (GCF_000264685.3) 16 NC_018167.2 (2316128..2424581)

Chromosome 17 - NC_044992.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108582512 Neighboring gene methyltransferase 16, RNA N6-adenosine Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC103878594 Neighboring gene clustered mitochondria homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPI vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
platelet-activating factor acetylhydrolase IB subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044992.1 Reference Panubis1.0 Primary Assembly

    Range
    2309670..2417873
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003912082.3 → XP_003912131.1  platelet-activating factor acetylhydrolase IB subunit alpha

    See identical proteins and their annotated locations for XP_003912131.1

    UniProtKB/TrEMBL
    A0A096P2D3
    Related
    ENSPANP00000019508.2, ENSPANT00000024042.3
    Conserved Domains (3) summary
    cd00200
    Location:104 → 408
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:111 → 148
    7WD40; WD40 repeat [structural motif]
    pfam08513
    Location:10 → 34
    LisH
Nucleotide Protein
Heading Accession and Version

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