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SFTPC surfactant protein C [ Papio anubis (olive baboon) ]

Gene ID: 101023763, updated on 8-Mar-2024

Summary

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Gene symbol
SFTPC
Gene description
surfactant protein C
See related
Ensembl:ENSPANG00000020597
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See SFTPC in Genome Data Viewer
Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 8 NC_044983.1 (20259135..20261846)
103 previous assembly Panu_3.0 (GCF_000264685.3) 8 NC_018159.2 (20181449..20184164)

Chromosome 8 - NC_044983.1Genomic Context describing neighboring genes Neighboring gene receptor accessory protein 4 Neighboring gene leucine rich repeat LGI family member 3 Neighboring gene bone morphogenetic protein 1 Neighboring gene phytanoyl-CoA 2-hydroxylase interacting protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in respiratory gaseous exchange by respiratory system IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in alveolar lamellar body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pulmonary surfactant-associated protein C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044983.1 Reference Panubis1.0 Primary Assembly

    Range
    20259135..20261846
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003902511.3 → XP_003902560.2  pulmonary surfactant-associated protein C

    UniProtKB/TrEMBL
    A0A096MW49, A0A096N8K2
    Related
    ENSPANP00000008933.3, ENSPANT00000010499.3
    Conserved Domains (1) summary
    smart00019
    Location:1 → 191
    SF_P; Pulmonary surfactant proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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