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GNPDA2 glucosamine-6-phosphate deaminase 2 [ Papio anubis (olive baboon) ]

Gene ID: 101022797, updated on 8-Mar-2024

Summary

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Gene symbol
GNPDA2
Gene description
glucosamine-6-phosphate deaminase 2
See related
Ensembl:ENSPANG00000020313
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See GNPDA2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 3 NC_044978.1 (90986548..91011796, complement)
103 previous assembly Panu_3.0 (GCF_000264685.3) 5 NC_018156.2 (93834800..93860019)

Chromosome 3 - NC_044978.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103884504 Neighboring gene GTP binding elongation factor GUF1 Neighboring gene cleavage and polyadenylation specificity factor subunit 7-like Neighboring gene 52 kDa repressor of the inhibitor of the protein kinase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucosamine-6-phosphate deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucosamine-6-phosphate isomerase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044978.1 Reference Panubis1.0 Primary Assembly

    Range
    90986548..91011796 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017958671.3 → XP_017814160.1  glucosamine-6-phosphate isomerase 2 isoform X3

    Conserved Domains (1) summary
    cl00339
    Location:1 → 183
    SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...

  2. XM_009206774.4 → XP_009205038.2  glucosamine-6-phosphate isomerase 2 isoform X1

    UniProtKB/TrEMBL
    A0A8I5NE98, A0A8I5NPN2
    Related
    ENSPANP00000055533.1, ENSPANT00000080219.1
    Conserved Domains (1) summary
    cl00339
    Location:1 → 253
    SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...

  3. XM_021938646.2 → XP_021794338.1  glucosamine-6-phosphate isomerase 2 isoform X3

    Conserved Domains (1) summary
    cl00339
    Location:1 → 183
    SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...

  4. XM_017958670.3 → XP_017814159.1  glucosamine-6-phosphate isomerase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8I5NHJ5
    Related
    ENSPANP00000054502.1, ENSPANT00000083680.1
    Conserved Domains (1) summary
    cl00339
    Location:24 → 234
    SugarP_isomerase; SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ...
Nucleotide Protein
Heading Accession and Version

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