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MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 [ Papio anubis (olive baboon) ]

Gene ID: 101022471, updated on 8-Mar-2024

Summary

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Gene symbol
MDGA2
Gene description
MAM domain containing glycosylphosphatidylinositol anchor 2
See related
Ensembl:ENSPANG00000017421
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See MDGA2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
17
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 7 NC_044982.1 (58685806..59525850)
103 previous assembly Panu_3.0 (GCF_000264685.3) 7 NC_018158.2 (103885818..104730953, complement)

Chromosome 7 - NC_044982.1Genomic Context describing neighboring genes Neighboring gene elongation factor 1-alpha 1 pseudogene Neighboring gene nucleophosmin pseudogene Neighboring gene uncharacterized LOC103886221 Neighboring gene uncharacterized LOC103886219 Neighboring gene carbohydrate sulfotransferase 10 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MAM domain-containing glycosylphosphatidylinositol anchor protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044982.1 Reference Panubis1.0 Primary Assembly

    Range
    58685806..59525850
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009211479.4 → XP_009209743.3  MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A2I3MCW1
    Related
    ENSPANP00000033583.2, ENSPANT00000057648.2
    Conserved Domains (6) summary
    smart00408
    Location:325 → 386
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:117 → 197
    IG; Immunoglobulin
    pfam00629
    Location:817 → 936
    MAM; MAM domain, meprin/A5/mu
    pfam13927
    Location:510 → 587
    Ig_3; Immunoglobulin domain
    cd00096
    Location:530 → 537
    Ig; Ig strand B [structural motif]
    cl11960
    Location:418 → 493
    Ig; Immunoglobulin domain

  2. XM_009211478.4 → XP_009209742.3  MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A2I3MWW1, A0A2I3NBQ5
    Related
    ENSPANP00000045342.1, ENSPANT00000040923.2
    Conserved Domains (5) summary
    smart00408
    Location:325 → 386
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:223 → 288
    IG_like; Immunoglobulin like
    pfam00629
    Location:817 → 989
    MAM; MAM domain, meprin/A5/mu
    pfam13927
    Location:115 → 183
    Ig_3; Immunoglobulin domain
    cl28434
    Location:418 → 493
    I-set; Immunoglobulin I-set domain

  3. XM_003901752.5 → XP_003901801.2  MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A2I3MS36
    Related
    ENSPANP00000038475.2, ENSPANT00000047133.2
    Conserved Domains (5) summary
    smart00408
    Location:27 → 88
    IGc2; Immunoglobulin C-2 Type
    pfam00629
    Location:519 → 691
    MAM; MAM domain, meprin/A5/mu
    pfam13927
    Location:212 → 289
    Ig_3; Immunoglobulin domain
    cd00096
    Location:213 → 216
    Ig; Ig strand A [structural motif]
    cl11960
    Location:120 → 195
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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