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DDX10 DEAD-box helicase 10 [ Papio anubis (olive baboon) ]

Gene ID: 101022399, updated on 8-Mar-2024

Summary

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Gene symbol
DDX10
Gene description
DEAD-box helicase 10
See related
Ensembl:ENSPANG00000015325
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See DDX10 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
20
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 12 NC_044987.1 (25403247..25696064, complement)
103 previous assembly Panu_3.0 (GCF_000264685.3) 14 NC_018165.2 (98515167..98806899)

Chromosome 12 - NC_044987.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC103877873 Neighboring gene mitochondrial import receptor subunit TOM5 homolog pseudogene Neighboring gene exophilin 5 Neighboring gene uncharacterized LOC116269688 Neighboring gene uncharacterized LOC116269689

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent RNA helicase DDX10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044987.1 Reference Panubis1.0 Primary Assembly

    Range
    25403247..25696064 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021926516.2 → XP_021782208.2  probable ATP-dependent RNA helicase DDX10 isoform X2

    Conserved Domains (4) summary
    pfam05262
    Location:645 → 774
    Borrelia_P83; Borrelia P83/100 protein
    COG0513
    Location:69 → 470
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
    cd17941
    Location:80 → 277
    DEADc_DDX10; DEAD-box helicase domain of DEAD box protein 10
    pfam13959
    Location:450 → 509
    DUF4217; Domain of unknown function (DUF4217)

  2. XM_009187219.4 → XP_009185483.3  probable ATP-dependent RNA helicase DDX10 isoform X1

    UniProtKB/TrEMBL
    A0A096MLR5
    Related
    ENSPANP00000000496.2, ENSPANT00000026090.3
    Conserved Domains (4) summary
    PTZ00121
    Location:648 → 824
    PTZ00121; MAEBL; Provisional
    COG0513
    Location:69 → 470
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
    cd17941
    Location:80 → 277
    DEADc_DDX10; DEAD-box helicase domain of DEAD box protein 10
    pfam13959
    Location:450 → 509
    DUF4217; Domain of unknown function (DUF4217)

  3. XM_021926517.2 → XP_021782209.2  probable ATP-dependent RNA helicase DDX10 isoform X3

    Conserved Domains (4) summary
    pfam05262
    Location:645 → 771
    Borrelia_P83; Borrelia P83/100 protein
    COG0513
    Location:69 → 470
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
    cd17941
    Location:80 → 277
    DEADc_DDX10; DEAD-box helicase domain of DEAD box protein 10
    pfam13959
    Location:450 → 509
    DUF4217; Domain of unknown function (DUF4217)
Nucleotide Protein
Heading Accession and Version

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