U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DDX60 DExD/H-box helicase 60 [ Papio anubis (olive baboon) ]

Gene ID: 101019154, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
DDX60
Gene description
DExD/H-box helicase 60
See related
Ensembl:ENSPANG00000019535
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See DDX60 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
43
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 3 NC_044978.1 (21277731..21432611)
103 previous assembly Panu_3.0 (GCF_000264685.3) 5 NC_018156.2 (162398261..162554199, complement)

Chromosome 3 - NC_044978.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108586147 Neighboring gene small nucleolar RNA SNORA51 Neighboring gene DExD/H-box 60 like Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC103884758 Neighboring gene annexin A10 Neighboring gene SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 Neighboring gene uncharacterized LOC103884756 Neighboring gene uncharacterized LOC103884754

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response to virus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable ATP-dependent RNA helicase DDX60

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044978.1 Reference Panubis1.0 Primary Assembly

    Range
    21277731..21432611
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031663996.1 → XP_031519856.1  probable ATP-dependent RNA helicase DDX60 isoform X5

    Conserved Domains (2) summary
    COG4581
    Location:688 → 1299
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
    cd18025
    Location:689 → 878
    DEXHc_DDX60; DEXH-box helicase domain of DEAD box protein 60

  2. XM_031663991.1 → XP_031519851.1  probable ATP-dependent RNA helicase DDX60 isoform X1

    UniProtKB/TrEMBL
    A0A096NQF3
    Conserved Domains (2) summary
    COG4581
    Location:762 → 1373
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
    cd18025
    Location:763 → 952
    DEXHc_DDX60; DEXH-box helicase domain of DEAD box protein 60

  3. XM_031663992.1 → XP_031519852.1  probable ATP-dependent RNA helicase DDX60 isoform X1

    UniProtKB/TrEMBL
    A0A096NQF3
    Conserved Domains (2) summary
    COG4581
    Location:762 → 1373
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
    cd18025
    Location:763 → 952
    DEXHc_DDX60; DEXH-box helicase domain of DEAD box protein 60

  4. XM_031663990.1 → XP_031519850.1  probable ATP-dependent RNA helicase DDX60 isoform X1

    UniProtKB/TrEMBL
    A0A096NQF3
    Conserved Domains (2) summary
    COG4581
    Location:762 → 1373
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
    cd18025
    Location:763 → 952
    DEXHc_DDX60; DEXH-box helicase domain of DEAD box protein 60

  5. XM_031663995.1 → XP_031519855.1  probable ATP-dependent RNA helicase DDX60 isoform X4

    Conserved Domains (2) summary
    COG4581
    Location:762 → 1373
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
    cd18025
    Location:763 → 952
    DEXHc_DDX60; DEXH-box helicase domain of DEAD box protein 60

  6. XM_031663994.1 → XP_031519854.1  probable ATP-dependent RNA helicase DDX60 isoform X3

    Conserved Domains (2) summary
    COG4581
    Location:762 → 1373
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
    cd18025
    Location:763 → 952
    DEXHc_DDX60; DEXH-box helicase domain of DEAD box protein 60

  7. XM_003899347.5 → XP_003899396.2  probable ATP-dependent RNA helicase DDX60 isoform X2

    Conserved Domains (2) summary
    COG4581
    Location:762 → 1373
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
    cd18025
    Location:763 → 952
    DEXHc_DDX60; DEXH-box helicase domain of DEAD box protein 60

  8. XM_031663993.1 → XP_031519853.1  probable ATP-dependent RNA helicase DDX60 isoform X1

    UniProtKB/TrEMBL
    A0A096NQF3
    Related
    ENSPANP00000015249.2, ENSPANT00000019967.3
    Conserved Domains (2) summary
    COG4581
    Location:762 → 1373
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
    cd18025
    Location:763 → 952
    DEXHc_DDX60; DEXH-box helicase domain of DEAD box protein 60

RNA

  1. XR_004182557.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.