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SGPP2 sphingosine-1-phosphate phosphatase 2 [ Papio anubis (olive baboon) ]

Gene ID: 101016966, updated on 8-Mar-2024

Summary

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Gene symbol
SGPP2
Gene description
sphingosine-1-phosphate phosphatase 2
See related
Ensembl:ENSPANG00000000793
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See SGPP2 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 10 NC_044985.1 (106224660..106360533)
103 previous assembly Panu_3.0 (GCF_000264685.3) 12 NC_018163.2 (108423732..108559626)

Chromosome 10 - NC_044985.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110740826 Neighboring gene uncharacterized LOC108581428 Neighboring gene homeobox protein NANOG pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene phenylalanyl-tRNA synthetase subunit beta Neighboring gene small nucleolar RNA U13 Neighboring gene monoacylglycerol O-acyltransferase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingosine-1-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingosine-1-phosphate phosphatase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044985.1 Reference Panubis1.0 Primary Assembly

    Range
    106224660..106360533
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003907999.4 → XP_003908048.2  sphingosine-1-phosphate phosphatase 2

    UniProtKB/TrEMBL
    A0A096NBQ7
    Related
    ENSPANP00000010212.2, ENSPANT00000024748.3
    Conserved Domains (1) summary
    cd03388
    Location:84 → 233
    PAP2_SPPase1; PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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