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PAPSS1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [ Papio anubis (olive baboon) ]

Gene ID: 101015458, updated on 8-Mar-2024

Summary

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Gene symbol
PAPSS1
Gene description
3'-phosphoadenosine 5'-phosphosulfate synthase 1
See related
Ensembl:ENSPANG00000015660
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See PAPSS1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 3 NC_044978.1 (81372682..81476249)
103 previous assembly Panu_3.0 (GCF_000264685.3) 5 NC_018156.2 (103349433..103453139, complement)

Chromosome 3 - NC_044978.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103884547 Neighboring gene U6 spliceosomal RNA Neighboring gene sphingomyelin synthase 2 Neighboring gene uncharacterized LOC108586047 Neighboring gene uncharacterized LOC103884544 Neighboring gene ras-related C3 botulinum toxin substrate 1 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables adenylylsulfate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sulfate adenylyltransferase (ATP) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfate assimilation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044978.1 Reference Panubis1.0 Primary Assembly

    Range
    81372682..81476249
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003899065.4 → XP_003899114.1  bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 isoform X1

    UniProtKB/TrEMBL
    A0A096N6Y3
    Related
    ENSPANP00000008264.2, ENSPANT00000004477.3
    Conserved Domains (3) summary
    cd00517
    Location:310 → 673
    ATPS; ATP-sulfurylase
    TIGR00339
    Location:289 → 672
    sopT; ATP sulphurylase
    pfam01583
    Location:107 → 261
    APS_kinase; Adenylylsulphate kinase

  2. XM_009207320.3 → XP_009205584.1  bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 isoform X2

    UniProtKB/TrEMBL
    A0A2I3MNZ8
    Related
    ENSPANP00000037508.2, ENSPANT00000049839.2
    Conserved Domains (2) summary
    cd00517
    Location:310 → 638
    ATPS; ATP-sulfurylase
    pfam01583
    Location:107 → 261
    APS_kinase; Adenylylsulphate kinase

  3. XM_009207322.4 → XP_009205586.1  bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 isoform X3

    See identical proteins and their annotated locations for XP_009205586.1

    Conserved Domains (2) summary
    cd00517
    Location:233 → 596
    ATPS; ATP-sulfurylase
    pfam01583
    Location:30 → 184
    APS_kinase; Adenylylsulphate kinase
Nucleotide Protein
Heading Accession and Version

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