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SGCG sarcoglycan gamma [ Papio anubis (olive baboon) ]

Gene ID: 101014375, updated on 8-Mar-2024

Summary

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Gene symbol
SGCG
Gene description
sarcoglycan gamma
See related
Ensembl:ENSPANG00000008185
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See SGCG in Genome Data Viewer
Location:
chromosome: 15
Exon count:
12
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 15 NC_044990.1 (3118453..3217394)
103 previous assembly Panu_3.0 (GCF_000264685.3) 17 NC_018168.2 (3187360..3286439)

Chromosome 15 - NC_044990.1Genomic Context describing neighboring genes Neighboring gene high mobility group protein HMG-I/HMG-Y-like Neighboring gene uncharacterized LOC103879093 Neighboring gene uncharacterized LOC116270543 Neighboring gene sacsin molecular chaperone Neighboring gene uncharacterized LOC103879094 Neighboring gene uncharacterized LOC116270544

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044990.1 Reference Panubis1.0 Primary Assembly

    Range
    3118453..3217394
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031655761.1 → XP_031511621.1  gamma-sarcoglycan isoform X3

    Conserved Domains (1) summary
    pfam04790
    Location:43 → 286
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  2. XM_031655757.1 → XP_031511617.1  gamma-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A096N136
    Related
    ENSPANP00000005978.3, ENSPANT00000008017.3
    Conserved Domains (1) summary
    pfam04790
    Location:43 → 296
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  3. XM_031655759.1 → XP_031511619.1  gamma-sarcoglycan isoform X2

    Conserved Domains (1) summary
    pfam04790
    Location:25 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  4. XM_031655760.1 → XP_031511620.1  gamma-sarcoglycan isoform X2

    Conserved Domains (1) summary
    pfam04790
    Location:25 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  5. XM_031655758.1 → XP_031511618.1  gamma-sarcoglycan isoform X2

    Conserved Domains (1) summary
    pfam04790
    Location:25 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

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