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ACER3 alkaline ceramidase 3 [ Papio anubis (olive baboon) ]

Gene ID: 101012210, updated on 18-Sep-2024

Summary

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Gene symbol
ACER3
Gene description
alkaline ceramidase 3
See related
Ensembl:ENSPANG00000024908
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See ACER3 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
13
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 12 NC_044987.1 (57252817..57415439, complement)
103 previous assembly Panu_3.0 (GCF_000264685.3) 14 NC_018165.2 (67043795..67206537)

Chromosome 12 - NC_044987.1Genomic Context describing neighboring genes Neighboring gene calpain 5 Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 Neighboring gene uncharacterized LOC108581990 Neighboring gene tsukushi, small leucine rich proteoglycan

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phytosphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkaline ceramidase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044987.1 Reference Panubis1.0 Primary Assembly

    Range
    57252817..57415439 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017948779.2 → XP_017804268.1  alkaline ceramidase 3 isoform X1

    UniProtKB/TrEMBL
    A0A096NB86
    Related
    ENSPANP00000010011.1, ENSPANT00000004675.3
    Conserved Domains (1) summary
    pfam05875
    Location:9 → 256
    Ceramidase; Ceramidase

  2. XM_031653093.1 → XP_031508953.1  alkaline ceramidase 3 isoform X2

    UniProtKB/TrEMBL
    A0A8I5NSH1
    Related
    ENSPANP00000057261.1, ENSPANT00000069114.1
    Conserved Domains (1) summary
    pfam05875
    Location:9 → 247
    Ceramidase

  3. XM_017948783.2 → XP_017804272.1  alkaline ceramidase 3 isoform X5

    Conserved Domains (1) summary
    pfam05875
    Location:1 → 164
    Ceramidase

  4. XM_017948781.3 → XP_017804270.1  alkaline ceramidase 3 isoform X3

    UniProtKB/TrEMBL
    A0A8I5NK04
    Related
    ENSPANP00000055930.1, ENSPANT00000079645.1
    Conserved Domains (1) summary
    pfam05875
    Location:1 → 217
    Ceramidase

  5. XM_009186972.3 → XP_009185236.1  alkaline ceramidase 3 isoform X4

    See identical proteins and their annotated locations for XP_009185236.1

    Conserved Domains (1) summary
    pfam05875
    Location:2 → 185
    Ceramidase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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