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ACOD1 aconitate decarboxylase 1 [ Papio anubis (olive baboon) ]

Gene ID: 101008365, updated on 8-Mar-2024

Summary

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Gene symbol
ACOD1
Gene description
aconitate decarboxylase 1
See related
Ensembl:ENSPANG00000010191
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See ACOD1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 15 NC_044990.1 (55384622..55394752)
103 previous assembly Panu_3.0 (GCF_000264685.3) 17 NC_018168.2 (54976854..54987457)

Chromosome 15 - NC_044990.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110741710 Neighboring gene potassium channel tetramerization domain containing 12 Neighboring gene 60S ribosomal protein L7 pseudogene Neighboring gene formin-like protein 18 Neighboring gene CLN5 intracellular trafficking protein Neighboring gene F-box and leucine rich repeat protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cis-aconitate decarboxylase
Names
immune-responsive gene 1 protein homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044990.1 Reference Panubis1.0 Primary Assembly

    Range
    55384622..55394752
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003913956.5 → XP_003914005.1  cis-aconitate decarboxylase isoform X1

    UniProtKB/TrEMBL
    A0A096MSC9
    Related
    ENSPANP00000002692.1, ENSPANT00000008904.3
    Conserved Domains (1) summary
    pfam03972
    Location:8 → 441
    MmgE_PrpD; MmgE/PrpD family

  2. XM_031655909.1 → XP_031511769.1  cis-aconitate decarboxylase isoform X2

    Conserved Domains (1) summary
    pfam03972
    Location:8 → 411
    MmgE_PrpD; MmgE/PrpD family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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