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SMPDL3B sphingomyelin phosphodiesterase acid like 3B [ Papio anubis (olive baboon) ]

Gene ID: 101008194, updated on 8-Mar-2024

Summary

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Gene symbol
SMPDL3B
Gene description
sphingomyelin phosphodiesterase acid like 3B
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See SMPDL3B in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 1 NC_044976.1 (26263967..26279043)
103 previous assembly Panu_3.0 (GCF_000264685.3) 1 NC_018152.2 (26221222..26236431)

Chromosome 1 - NC_044976.1Genomic Context describing neighboring genes Neighboring gene thymocyte selection associated family member 2 Neighboring gene replication protein A2 Neighboring gene XK related 8 Neighboring gene EYA transcriptional coactivator and phosphatase 3 Neighboring gene ADP-ribosylation factor-like protein 8B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingomyelin phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sphingomyelin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: acid sphingomyelinase-like phosphodiesterase 3b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044976.1 Reference Panubis1.0 Primary Assembly

    Range
    26263967..26279043
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003891439.5 → XP_003891488.2  LOW QUALITY PROTEIN: acid sphingomyelinase-like phosphodiesterase 3b

    Conserved Domains (1) summary
    cd00842
    Location:71 → 371
    MPP_ASMase; acid sphingomyelinase and related proteins, metallophosphatase domain
Nucleotide Protein
Heading Accession and Version

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