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CLEC16A C-type lectin domain containing 16A [ Papio anubis (olive baboon) ]

Gene ID: 101007434, updated on 8-Mar-2024

Summary

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Gene symbol
CLEC16A
Gene description
C-type lectin domain containing 16A
See related
Ensembl:ENSPANG00000000525
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See CLEC16A in Genome Data Viewer
Location:
chromosome: 18
Exon count:
28
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 18 NC_044993.1 (62791804..63029616, complement)
103 previous assembly Panu_3.0 (GCF_000264685.3) 20 NC_018171.2 (10306228..10543817)

Chromosome 18 - NC_044993.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein C pseudogene Neighboring gene uncharacterized LOC116271322 Neighboring gene uncharacterized LOC103880314 Neighboring gene uncharacterized LOC116271250 Neighboring gene uncharacterized LOC110741998 Neighboring gene Dexi homolog Neighboring gene class II major histocompatibility complex transactivator

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome to lysosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of autophagosome maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endolysosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein CLEC16A
Names
C-type lectin domain family 16 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044993.1 Reference Panubis1.0 Primary Assembly

    Range
    62791804..63029616 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017953179.2 → XP_017808668.1  protein CLEC16A isoform X5

    Conserved Domains (1) summary
    pfam09758
    Location:51 → 198
    FPL; Uncharacterized conserved protein

  2. XM_009195987.2 → XP_009194251.1  protein CLEC16A isoform X3

    Conserved Domains (1) summary
    pfam09758
    Location:51 → 198
    FPL; uncharacterized conserved protein

  3. XM_009195985.2 → XP_009194249.1  protein CLEC16A isoform X1

    UniProtKB/TrEMBL
    A0A096NLP1
    Related
    ENSPANP00000013899.2, ENSPANT00000022751.3
    Conserved Domains (1) summary
    pfam09758
    Location:51 → 198
    FPL; uncharacterized conserved protein

  4. XM_031658479.1 → XP_031514339.1  protein CLEC16A isoform X4

    Conserved Domains (1) summary
    pfam09758
    Location:51 → 198
    FPL; Uncharacterized conserved protein

  5. XM_009195990.3 → XP_009194254.1  protein CLEC16A isoform X6

    Conserved Domains (1) summary
    pfam09758
    Location:51 → 198
    FPL; Uncharacterized conserved protein

  6. XM_009195986.3 → XP_009194250.1  protein CLEC16A isoform X2

    Conserved Domains (1) summary
    pfam09758
    Location:51 → 198
    FPL; uncharacterized conserved protein

  7. XM_009195991.4 → XP_009194255.1  protein CLEC16A isoform X7

    Conserved Domains (1) summary
    pfam09758
    Location:6 → 90
    FPL; Uncharacterized conserved protein

  8. XM_009195994.2 → XP_009194258.1  protein CLEC16A isoform X11

    Conserved Domains (1) summary
    pfam09758
    Location:51 → 198
    FPL; Uncharacterized conserved protein

  9. XM_009195993.2 → XP_009194257.1  protein CLEC16A isoform X8

    Conserved Domains (1) summary
    pfam09758
    Location:51 → 198
    FPL; Uncharacterized conserved protein

  10. XM_021931752.2 → XP_021787444.1  protein CLEC16A isoform X9

    Conserved Domains (1) summary
    pfam09758
    Location:51 → 198
    FPL; Uncharacterized conserved protein

  11. XM_003916534.4 → XP_003916583.1  protein CLEC16A isoform X10

    UniProtKB/TrEMBL
    A0A2I3LRZ0
    Related
    ENSPANP00000026202.2, ENSPANT00000035439.2
    Conserved Domains (1) summary
    pfam09758
    Location:51 → 198
    FPL; Uncharacterized conserved protein
Nucleotide Protein
Heading Accession and Version

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