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SIGLEC1 sialic acid binding Ig like lectin 1 [ Papio anubis (olive baboon) ]

Gene ID: 101004236, updated on 8-Mar-2024

Summary

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Gene symbol
SIGLEC1
Gene description
sialic acid binding Ig like lectin 1
See related
Ensembl:ENSPANG00000023582
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See SIGLEC1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
23
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 16 NC_044991.1 (54774300..54799273)
103 previous assembly Panu_3.0 (GCF_000264685.3) 10 NC_018161.2 (36670716..36695687, complement)

Chromosome 16 - NC_044991.1Genomic Context describing neighboring genes Neighboring gene adipose secreted signaling protein Neighboring gene heat shock protein family A (Hsp70) member 12B Neighboring gene uncharacterized LOC108580647 Neighboring gene ADAM metallopeptidase domain 33 Neighboring gene GDNF family receptor alpha 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
sialoadhesin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044991.1 Reference Panubis1.0 Primary Assembly

    Range
    54774300..54799273
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009216491.3 → XP_009214755.3  sialoadhesin isoform X1

    UniProtKB/TrEMBL
    A0A096NVB6, A0A8I5NUM3
    Conserved Domains (8) summary
    smart00408
    Location:254 → 312
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:338 → 402
    IG; Immunoglobulin
    smart00410
    Location:431 → 503
    IG_like; Immunoglobulin like
    cd00096
    Location:1193 → 1255
    Ig; Immunoglobulin domain
    pfam08205
    Location:142 → 226
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13895
    Location:514 → 590
    Ig_2; Immunoglobulin domain
    pfam13927
    Location:710 → 775
    Ig_3; Immunoglobulin domain
    cl11960
    Location:21 → 136
    Ig; Immunoglobulin domain

  2. XM_009216492.3 → XP_009214756.3  sialoadhesin isoform X1

    UniProtKB/TrEMBL
    A0A096NVB6, A0A8I5NUM3
    Conserved Domains (8) summary
    smart00408
    Location:254 → 312
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:338 → 402
    IG; Immunoglobulin
    smart00410
    Location:431 → 503
    IG_like; Immunoglobulin like
    cd00096
    Location:1193 → 1255
    Ig; Immunoglobulin domain
    pfam08205
    Location:142 → 226
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13895
    Location:514 → 590
    Ig_2; Immunoglobulin domain
    pfam13927
    Location:710 → 775
    Ig_3; Immunoglobulin domain
    cl11960
    Location:21 → 136
    Ig; Immunoglobulin domain

  3. XM_009216493.3 → XP_009214757.3  sialoadhesin isoform X1

    UniProtKB/TrEMBL
    A0A096NVB6, A0A8I5NUM3
    Conserved Domains (8) summary
    smart00408
    Location:254 → 312
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:338 → 402
    IG; Immunoglobulin
    smart00410
    Location:431 → 503
    IG_like; Immunoglobulin like
    cd00096
    Location:1193 → 1255
    Ig; Immunoglobulin domain
    pfam08205
    Location:142 → 226
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13895
    Location:514 → 590
    Ig_2; Immunoglobulin domain
    pfam13927
    Location:710 → 775
    Ig_3; Immunoglobulin domain
    cl11960
    Location:21 → 136
    Ig; Immunoglobulin domain

  4. XM_021921197.2 → XP_021776889.2  sialoadhesin isoform X1

    UniProtKB/TrEMBL
    A0A096NVB6, A0A8I5NUM3
    Conserved Domains (8) summary
    smart00408
    Location:254 → 312
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:338 → 402
    IG; Immunoglobulin
    smart00410
    Location:431 → 503
    IG_like; Immunoglobulin like
    cd00096
    Location:1193 → 1255
    Ig; Immunoglobulin domain
    pfam08205
    Location:142 → 226
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13895
    Location:514 → 590
    Ig_2; Immunoglobulin domain
    pfam13927
    Location:710 → 775
    Ig_3; Immunoglobulin domain
    cl11960
    Location:21 → 136
    Ig; Immunoglobulin domain

  5. XM_017944966.3 → XP_017800455.3  sialoadhesin isoform X1

    UniProtKB/TrEMBL
    A0A096NVB6, A0A8I5NUM3
    Conserved Domains (8) summary
    smart00408
    Location:254 → 312
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:338 → 402
    IG; Immunoglobulin
    smart00410
    Location:431 → 503
    IG_like; Immunoglobulin like
    cd00096
    Location:1193 → 1255
    Ig; Immunoglobulin domain
    pfam08205
    Location:142 → 226
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13895
    Location:514 → 590
    Ig_2; Immunoglobulin domain
    pfam13927
    Location:710 → 775
    Ig_3; Immunoglobulin domain
    cl11960
    Location:21 → 136
    Ig; Immunoglobulin domain

  6. XM_003905011.5 → XP_003905060.3  sialoadhesin isoform X1

    UniProtKB/TrEMBL
    A0A096NVB6, A0A8I5NUM3
    Related
    ENSPANP00000016991.3, ENSPANT00000015222.3
    Conserved Domains (8) summary
    smart00408
    Location:254 → 312
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:338 → 402
    IG; Immunoglobulin
    smart00410
    Location:431 → 503
    IG_like; Immunoglobulin like
    cd00096
    Location:1193 → 1255
    Ig; Immunoglobulin domain
    pfam08205
    Location:142 → 226
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13895
    Location:514 → 590
    Ig_2; Immunoglobulin domain
    pfam13927
    Location:710 → 775
    Ig_3; Immunoglobulin domain
    cl11960
    Location:21 → 136
    Ig; Immunoglobulin domain

  7. XM_031656595.1 → XP_031512455.1  sialoadhesin isoform X2

    UniProtKB/TrEMBL
    A0A8I5NUM3
    Related
    ENSPANP00000061204.1, ENSPANT00000078320.1
    Conserved Domains (8) summary
    smart00408
    Location:254 → 312
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:338 → 402
    IG; Immunoglobulin
    smart00410
    Location:431 → 503
    IG_like; Immunoglobulin like
    cd00096
    Location:1193 → 1255
    Ig; Immunoglobulin domain
    pfam08205
    Location:142 → 226
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13895
    Location:514 → 590
    Ig_2; Immunoglobulin domain
    pfam13927
    Location:710 → 775
    Ig_3; Immunoglobulin domain
    cl11960
    Location:21 → 136
    Ig; Immunoglobulin domain
Nucleotide Protein
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