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GALNT18 polypeptide N-acetylgalactosaminyltransferase 18 [ Papio anubis (olive baboon) ]

Gene ID: 101003332, updated on 8-Mar-2024

Summary

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Gene symbol
GALNT18
Gene description
polypeptide N-acetylgalactosaminyltransferase 18
See related
Ensembl:ENSPANG00000022855
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Also known as
GALNTL4
Orthologs
human mouse all
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Genomic context

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See GALNT18 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
16
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 12 NC_044987.1 (70634999..70996435, complement)
103 previous assembly Panu_3.0 (GCF_000264685.3) 14 NC_018165.2 (53569051..53931927)

Chromosome 12 - NC_044987.1Genomic Context describing neighboring genes Neighboring gene activating transcription factor 7-interacting protein 2-like Neighboring gene uncharacterized LOC103877662 Neighboring gene uncharacterized LOC108581964 Neighboring gene 40S ribosomal protein S17 pseudogene Neighboring gene uncharacterized LOC103877661 Neighboring gene uncharacterized LOC108581959 Neighboring gene uncharacterized LOC110741221 Neighboring gene uncharacterized LOC116269747

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 18
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044987.1 Reference Panubis1.0 Primary Assembly

    Range
    70634999..70996435 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017948635.3 → XP_017804124.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X4

    UniProtKB/TrEMBL
    A0A096NRX7, A0A8I5NFF0
    Related
    ENSPANP00000056207.1, ENSPANT00000080138.1
    Conserved Domains (2) summary
    cd02510
    Location:157 → 458
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:471 → 596
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

  2. XM_017948633.3 → XP_017804122.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X1

    UniProtKB/TrEMBL
    A0A096NRX7, A0A8I5MWN7
    Related
    ENSPANP00000049761.1, ENSPANT00000080463.1

  3. XM_031653335.1 → XP_031509195.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X6

    UniProtKB/TrEMBL
    A0A096NRX7
    Conserved Domains (2) summary
    cd00161
    Location:409 → 534
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    cl11394
    Location:157 → 396
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  4. XM_017948636.3 → XP_017804125.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X5

    UniProtKB/TrEMBL
    A0A096NRX7

  5. XM_021926083.2 → XP_021781775.2  polypeptide N-acetylgalactosaminyltransferase 18 isoform X2

    UniProtKB/TrEMBL
    A0A8I5MYS4, A0A8I5NJZ4
    Related
    ENSPANP00000047927.1, ENSPANT00000072038.1
    Conserved Domains (2) summary
    cd02510
    Location:173 → 474
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:487 → 612
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

  6. XM_017948634.3 → XP_017804123.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X3

    UniProtKB/TrEMBL
    A0A096NRX7
    Related
    ENSPANP00000015797.3, ENSPANT00000021517.3

  7. XM_017948638.3 → XP_017804127.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X7

    UniProtKB/TrEMBL
    A0A096NRX7

RNA

  1. XR_004177488.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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