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GPD2 glycerol-3-phosphate dehydrogenase 2 [ Papio anubis (olive baboon) ]

Gene ID: 101002517, updated on 11-Apr-2024

Summary

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Gene symbol
GPD2
Gene description
glycerol-3-phosphate dehydrogenase 2
See related
Ensembl:ENSPANG00000022223
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See GPD2 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
21
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 10 NC_044985.1 (40175373..40324534)
103 previous assembly Panu_3.0 (GCF_000264685.3) 12 NC_018163.2 (42140713..42288450)

Chromosome 10 - NC_044985.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene small nucleolar RNA U13 Neighboring gene 60S acidic ribosomal protein P0 pseudogene Neighboring gene cyclin-dependent kinase 7 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycerol-3-phosphate dehydrogenase (quinone) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerol-3-phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycerol-3-phosphate dehydrogenase (FAD) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerol-3-phosphate dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044985.1 Reference Panubis1.0 Primary Assembly

    Range
    40175373..40324534
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003907492.5 → XP_003907541.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_003907541.1

    UniProtKB/TrEMBL
    A0A096NXW6, A0A8I5NQ91
    Conserved Domains (2) summary
    cd00051
    Location:627 → 689
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl25573
    Location:1 → 599
    DAO_C; C-terminal domain of alpha-glycerophosphate oxidase

  2. XM_003907491.5 → XP_003907540.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_003907540.1

    UniProtKB/TrEMBL
    A0A096NXW6, A0A8I5NQ91
    Related
    ENSPANP00000061169.1, ENSPANT00000070758.1
    Conserved Domains (2) summary
    cd00051
    Location:627 → 689
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl25573
    Location:1 → 599
    DAO_C; C-terminal domain of alpha-glycerophosphate oxidase

  3. XM_017946541.3 → XP_017802030.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A096NXW6
    Conserved Domains (5) summary
    COG0578
    Location:23 → 565
    GlpA; Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
    cd00051
    Location:593 → 655
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam13499
    Location:595 → 654
    EF-hand_7; EF-hand domain pair
    pfam16901
    Location:428 → 554
    DAO_C; C-terminal domain of alpha-glycerophosphate oxidase
    cl21454
    Location:35 → 73
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

  4. XM_009182259.4 → XP_009180523.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_009180523.1

    UniProtKB/TrEMBL
    A0A096NXW6, A0A8I5NQ91
    Conserved Domains (2) summary
    cd00051
    Location:627 → 689
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl25573
    Location:1 → 599
    DAO_C; C-terminal domain of alpha-glycerophosphate oxidase

  5. XM_009182262.4 → XP_009180526.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A096NXW6
    Conserved Domains (5) summary
    COG0578
    Location:32 → 574
    GlpA; Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
    cd00051
    Location:602 → 664
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam13499
    Location:604 → 663
    EF-hand_7; EF-hand domain pair
    pfam16901
    Location:437 → 563
    DAO_C; C-terminal domain of alpha-glycerophosphate oxidase
    cl21454
    Location:44 → 82
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

  6. XM_009182263.4 → XP_009180527.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X3

    See identical proteins and their annotated locations for XP_009180527.1

    UniProtKB/TrEMBL
    A0A096NXW6
    Conserved Domains (5) summary
    COG0578
    Location:23 → 565
    GlpA; Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
    cd00051
    Location:593 → 655
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam13499
    Location:595 → 654
    EF-hand_7; EF-hand domain pair
    pfam16901
    Location:428 → 554
    DAO_C; C-terminal domain of alpha-glycerophosphate oxidase
    cl21454
    Location:35 → 73
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

  7. XM_017946542.3 → XP_017802031.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A096NXW6
    Conserved Domains (5) summary
    COG0578
    Location:23 → 565
    GlpA; Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
    cd00051
    Location:593 → 655
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam13499
    Location:595 → 654
    EF-hand_7; EF-hand domain pair
    pfam16901
    Location:428 → 554
    DAO_C; C-terminal domain of alpha-glycerophosphate oxidase
    cl21454
    Location:35 → 73
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

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