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GPLD1 glycosylphosphatidylinositol specific phospholipase D1 [ Papio anubis (olive baboon) ]

Gene ID: 101001857, updated on 8-Mar-2024

Summary

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Gene symbol
GPLD1
Gene description
glycosylphosphatidylinositol specific phospholipase D1
See related
Ensembl:ENSPANG00000010501
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See GPLD1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
26
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 6 NC_044981.1 (24424107..24493479, complement)
103 previous assembly Panu_3.0 (GCF_000264685.3) 4 NC_018155.2 (24446362..24511178, complement)

Chromosome 6 - NC_044981.1Genomic Context describing neighboring genes Neighboring gene doublecortin domain containing 2 Neighboring gene uncharacterized LOC103883529 Neighboring gene U6 spliceosomal RNA Neighboring gene magnesium transporter MRS2 Neighboring gene aldehyde dehydrogenase 5 family member A1 Neighboring gene KIAA0319 ortholog Neighboring gene keratin, type II cytoskeletal 8-like Neighboring gene tyrosyl-DNA phosphodiesterase 2 Neighboring gene acyl-CoA thioesterase 13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosylphosphatidylinositol phospholipase D activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor release IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol-glycan-specific phospholipase D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044981.1 Reference Panubis1.0 Primary Assembly

    Range
    24424107..24493479 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021937035.2 → XP_021792727.1  phosphatidylinositol-glycan-specific phospholipase D isoform X2

    UniProtKB/TrEMBL
    A0A8I5MY21
    Conserved Domains (3) summary
    smart00191
    Location:447 → 503
    Int_alpha; Integrin alpha (beta-propellor repeats)
    pfam00882
    Location:29 → 212
    Zn_dep_PLPC; Zinc dependent phospholipase C
    pfam01839
    Location:515 → 542
    FG-GAP; FG-GAP repeat

  2. XM_021937036.2 → XP_021792728.1  phosphatidylinositol-glycan-specific phospholipase D isoform X3

    UniProtKB/TrEMBL
    A0A8I5MY21
    Conserved Domains (3) summary
    smart00191
    Location:397 → 453
    Int_alpha; Integrin alpha (beta-propellor repeats)
    pfam00882
    Location:35 → 218
    Zn_dep_PLPC; Zinc dependent phospholipase C
    pfam01839
    Location:465 → 492
    FG-GAP; FG-GAP repeat

  3. XM_009204508.2 → XP_009202772.1  phosphatidylinositol-glycan-specific phospholipase D isoform X1

    UniProtKB/TrEMBL
    A0A096NLB0, A0A8I5MY21
    Related
    ENSPANP00000013768.2, ENSPANT00000015891.3
    Conserved Domains (3) summary
    smart00191
    Location:453 → 509
    Int_alpha; Integrin alpha (beta-propellor repeats)
    pfam00882
    Location:35 → 218
    Zn_dep_PLPC; Zinc dependent phospholipase C
    pfam01839
    Location:521 → 548
    FG-GAP; FG-GAP repeat

  4. XM_021937037.1 → XP_021792729.1  phosphatidylinositol-glycan-specific phospholipase D isoform X4

    Conserved Domains (2) summary
    smart00191
    Location:317 → 373
    Int_alpha; Integrin alpha (beta-propellor repeats)
    pfam01839
    Location:385 → 412
    FG-GAP; FG-GAP repeat

  5. XM_021937038.2 → XP_021792730.1  phosphatidylinositol-glycan-specific phospholipase D isoform X5

    Conserved Domains (2) summary
    smart00191
    Location:283 → 339
    Int_alpha; Integrin alpha (beta-propellor repeats)
    pfam01839
    Location:351 → 378
    FG-GAP; FG-GAP repeat
Nucleotide Protein
Heading Accession and Version

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