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PSMA4 proteasome 20S subunit alpha 4 [ Papio anubis (olive baboon) ]

Gene ID: 101000967, updated on 8-Mar-2024

Summary

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Gene symbol
PSMA4
Gene description
proteasome 20S subunit alpha 4
See related
Ensembl:ENSPANG00000015816
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See PSMA4 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 7 NC_044982.1 (110534630..110543635, complement)
103 previous assembly Panu_3.0 (GCF_000264685.3) 7 NC_018158.2 (53153256..53162253)

Chromosome 7 - NC_044982.1Genomic Context describing neighboring genes Neighboring gene cholinergic receptor nicotinic alpha 3 subunit Neighboring gene cholinergic receptor nicotinic alpha 5 subunit Neighboring gene hydroxylysine kinase Neighboring gene iron responsive element binding protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex, alpha-subunit complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proteasome subunit alpha type-4
Names
proteasome subunit alpha 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044982.1 Reference Panubis1.0 Primary Assembly

    Range
    110534630..110543635 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003901272.3 → XP_003901321.1  proteasome subunit alpha type-4 isoform X1

    See identical proteins and their annotated locations for XP_003901321.1

    UniProtKB/TrEMBL
    A0A096NMW0
    Related
    ENSPANP00000014320.2, ENSPANT00000021770.3
    Conserved Domains (1) summary
    cd03752
    Location:3 → 216
    proteasome_alpha_type_4; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...

  2. XM_021940801.2 → XP_021796493.1  proteasome subunit alpha type-4 isoform X2

    Conserved Domains (1) summary
    cl00467
    Location:1 → 145
    Ntn_hydrolase; The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are activated autocatalytically via an N-terminally lcated nucleophilic amino acid. N-terminal nucleophile (NTN-) hydrolase superfamily, which contains a ...
Nucleotide Protein
Heading Accession and Version

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