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PHF5A PHD finger protein 5A [ Papio anubis (olive baboon) ]

Gene ID: 101000185, updated on 8-Mar-2024

Summary

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Gene symbol
PHF5A
Gene description
PHD finger protein 5A
See related
Ensembl:ENSPANG00000011337
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See PHF5A in Genome Data Viewer
Location:
chromosome: 16
Exon count:
4
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 16 NC_044991.1 (9219108..9229307)
103 previous assembly Panu_3.0 (GCF_000264685.3) 10 NC_018161.2 (82087254..82097980, complement)

Chromosome 16 - NC_044991.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase III subunit H Neighboring gene aconitase 2 Neighboring gene transducer of ERBB2, 2 Neighboring gene ATP synthase subunit f, mitochondrial pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U12-type spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U2 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PHD finger-like domain-containing protein 5A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044991.1 Reference Panubis1.0 Primary Assembly

    Range
    9219108..9229307
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003905603.5 → XP_003905652.1  PHD finger-like domain-containing protein 5A

    See identical proteins and their annotated locations for XP_003905652.1

    UniProtKB/TrEMBL
    A0A096NKA7
    Related
    ENSPANP00000013412.1, ENSPANT00000028919.3
    Conserved Domains (1) summary
    pfam03660
    Location:1 → 104
    PHF5; PHF5-like protein
Nucleotide Protein
Heading Accession and Version

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