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PLA2G6 phospholipase A2 group VI [ Papio anubis (olive baboon) ]

Gene ID: 100999243, updated on 8-Mar-2024

Summary

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Gene symbol
PLA2G6
Gene description
phospholipase A2 group VI
See related
Ensembl:ENSPANG00000020907
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See PLA2G6 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
18
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 16 NC_044991.1 (12494278..12567390)
103 previous assembly Panu_3.0 (GCF_000264685.3) 10 NC_018161.2 (78733134..78804896, complement)

Chromosome 16 - NC_044991.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 184B Neighboring gene MAF bZIP transcription factor F Neighboring gene BAR/IMD domain containing adaptor protein 2 like 2 Neighboring gene solute carrier family 16 member 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-independent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiolipin acyl-chain remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
85/88 kDa calcium-independent phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044991.1 Reference Panubis1.0 Primary Assembly

    Range
    12494278..12567390
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021921544.2 → XP_021777236.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    UniProtKB/TrEMBL
    A0A2I3LRI0
    Conserved Domains (4) summary
    cd07212
    Location:480 → 793
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    COG0666
    Location:69 → 227
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd00204
    Location:285 → 403
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:286 → 314
    ANK; ANK repeat [structural motif]

  2. XM_021921546.2 → XP_021777238.1  85/88 kDa calcium-independent phospholipase A2 isoform X2

    UniProtKB/TrEMBL
    A0A2I3N1H7
    Conserved Domains (5) summary
    cd07212
    Location:426 → 739
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    COG0666
    Location:69 → 227
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd00204
    Location:214 → 370
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:286 → 314
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:350 → 395
    Ank_4; Ankyrin repeats (many copies)

  3. XM_021921548.1 → XP_021777240.1  85/88 kDa calcium-independent phospholipase A2 isoform X3

    UniProtKB/TrEMBL
    A0A2I3LRI0
    Conserved Domains (4) summary
    COG0666
    Location:69 → 227
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd00204
    Location:285 → 403
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:286 → 314
    ANK; ANK repeat [structural motif]
    cl11396
    Location:480 → 626
    Patatin_and_cPLA2; Patatins and Phospholipases

  4. XM_021921545.2 → XP_021777237.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    UniProtKB/TrEMBL
    A0A2I3LRI0
    Conserved Domains (4) summary
    cd07212
    Location:480 → 793
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    COG0666
    Location:69 → 227
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd00204
    Location:285 → 403
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:286 → 314
    ANK; ANK repeat [structural motif]

  5. XM_021921547.2 → XP_021777239.1  85/88 kDa calcium-independent phospholipase A2 isoform X2

    UniProtKB/TrEMBL
    A0A2I3N1H7
    Related
    ENSPANP00000041847.2, ENSPANT00000052822.2
    Conserved Domains (5) summary
    cd07212
    Location:426 → 739
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    COG0666
    Location:69 → 227
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd00204
    Location:214 → 370
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:286 → 314
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:350 → 395
    Ank_4; Ankyrin repeats (many copies)

  6. XM_003905530.5 → XP_003905579.4  85/88 kDa calcium-independent phospholipase A2 isoform X1

    UniProtKB/TrEMBL
    A0A2I3LRI0
    Related
    ENSPANP00000026086.2, ENSPANT00000051866.2
    Conserved Domains (4) summary
    cd07212
    Location:480 → 793
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    COG0666
    Location:69 → 227
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd00204
    Location:285 → 403
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:286 → 314
    ANK; ANK repeat [structural motif]

  7. XM_021921550.2 → XP_021777242.1  85/88 kDa calcium-independent phospholipase A2 isoform X4

    Conserved Domains (3) summary
    cd07212
    Location:254 → 567
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    cd00204
    Location:59 → 177
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:60 → 88
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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