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MANBA mannosidase beta [ Papio anubis (olive baboon) ]

Gene ID: 100997443, updated on 8-Mar-2024

Summary

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Gene symbol
MANBA
Gene description
mannosidase beta
See related
Ensembl:ENSPANG00000016697
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See MANBA in Genome Data Viewer
Location:
chromosome: 3
Exon count:
20
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 3 NC_044978.1 (86311747..86448599)
103 previous assembly Panu_3.0 (GCF_000264685.3) 5 NC_018156.2 (98495500..98634610, complement)

Chromosome 3 - NC_044978.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108586032 Neighboring gene ubiquitin conjugating enzyme E2 D3 Neighboring gene uncharacterized LOC108586031 Neighboring gene ribosome biogenesis protein WDR12 pseudogene Neighboring gene protein MANBAL pseudogene Neighboring gene keratin, type II cytoskeletal 8 pseudogene Neighboring gene 60S ribosomal protein L17-like Neighboring gene nuclear factor kappa B subunit 1 Neighboring gene protein argonaute 14-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoprotein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-mannosidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044978.1 Reference Panubis1.0 Primary Assembly

    Range
    86311747..86448599
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003899023.3 → XP_003899072.1  beta-mannosidase isoform X1

    UniProtKB/TrEMBL
    A0A096MS94
    Related
    ENSPANP00000002655.3, ENSPANT00000009031.3
    Conserved Domains (3) summary
    COG3250
    Location:24 → 694
    LacZ; Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]
    pfam02837
    Location:80 → 143
    Glyco_hydro_2_N; Glycosyl hydrolases family 2, sugar binding domain
    cl23725
    Location:343 → 457
    Glyco_hydro_1; Glycosyl hydrolase family 1

  2. XM_021938670.2 → XP_021794362.1  beta-mannosidase isoform X3

    UniProtKB/TrEMBL
    A0A2I3M401
    Conserved Domains (3) summary
    cl30613
    Location:1 → 573
    LacZ; Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]
    pfam17753
    Location:680 → 756
    Ig_mannosidase; Ig-fold domain
    pfam17786
    Location:579 → 674
    Mannosidase_ig; Mannosidase Ig/CBM-like domain

  3. XM_031664402.1 → XP_031520262.1  beta-mannosidase isoform X3

    UniProtKB/TrEMBL
    A0A2I3M401
    Conserved Domains (3) summary
    cl30613
    Location:1 → 573
    LacZ; Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]
    pfam17753
    Location:680 → 756
    Ig_mannosidase; Ig-fold domain
    pfam17786
    Location:579 → 674
    Mannosidase_ig; Mannosidase Ig/CBM-like domain

  4. XM_017958892.3 → XP_017814381.1  beta-mannosidase isoform X2

    UniProtKB/TrEMBL
    A0A2I3M401

  5. XM_009207267.4 → XP_009205531.1  beta-mannosidase isoform X3

    UniProtKB/TrEMBL
    A0A2I3M401
    Conserved Domains (3) summary
    cl30613
    Location:1 → 573
    LacZ; Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]
    pfam17753
    Location:680 → 756
    Ig_mannosidase; Ig-fold domain
    pfam17786
    Location:579 → 674
    Mannosidase_ig; Mannosidase Ig/CBM-like domain
Nucleotide Protein
Heading Accession and Version

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