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PCYT1B phosphate cytidylyltransferase 1B, choline [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100995988, updated on 8-Mar-2024

Summary

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Gene symbol
PCYT1B
Gene description
phosphate cytidylyltransferase 1B, choline
See related
Ensembl:ENSPPAG00000028021
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See PCYT1B in Genome Data Viewer
Location:
chromosome: X
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) X NC_073272.2 (26356526..26471450, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) X NC_073272.1 (26359913..26474830, complement)

Chromosome X - NC_073272.2Genomic Context describing neighboring genes Neighboring gene small ribosomal subunit protein eS26-like Neighboring gene small nuclear ribonucleoprotein E-like Neighboring gene pyruvate dehydrogenase kinase 3 Neighboring gene large ribosomal subunit protein uL14-like Neighboring gene small Cajal body-specific RNA 24 Neighboring gene DNA polymerase alpha 1, catalytic subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline-phosphate cytidylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylcholine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CDP-choline pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline-phosphate cytidylyltransferase B
Names
phosphate cytidylyltransferase 1, choline, beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073272.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    26356526..26471450 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034949501.4 → XP_034805392.1  choline-phosphate cytidylyltransferase B isoform X2

    UniProtKB/TrEMBL
    A0A2R8ZXB6, A0A2R9A124
    Conserved Domains (1) summary
    PLN02413
    Location:54 → 296
    PLN02413; choline-phosphate cytidylyltransferase

  2. XM_003819584.4 → XP_003819632.1  choline-phosphate cytidylyltransferase B isoform X1

    See identical proteins and their annotated locations for XP_003819632.1

    UniProtKB/TrEMBL
    A0A2R8ZXA1, A0A2R8ZXB6
    Related
    ENSPPAP00000009605.1
    Conserved Domains (1) summary
    PLN02413
    Location:72 → 314
    PLN02413; choline-phosphate cytidylyltransferase
Nucleotide Protein
Heading Accession and Version

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