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GYG2 glycogenin 2 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100995852, updated on 10-Oct-2024

Summary

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Gene symbol
GYG2
Gene description
glycogenin 2
See related
Ensembl:ENSPPAG00000042652
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human all
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Genomic context

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See GYG2 in Genome Data Viewer
Location:
chromosome: X
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) X NC_073272.2 (2570986..2624462)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) X NC_073272.1 (2574962..2628134)

Chromosome X - NC_073272.2Genomic Context describing neighboring genes Neighboring gene CD99 molecule (Xg blood group) Neighboring gene Xg glycoprotein (Xg blood group) Neighboring gene arylsulfatase D Neighboring gene arylsulfatase L

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogenin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073272.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    2570986..2624462
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063601826.1 → XP_063457896.1  glycogenin-2 isoform X1

    UniProtKB/TrEMBL
    A0A2R9CDM7

  2. XM_063601827.1 → XP_063457897.1  glycogenin-2 isoform X2

  3. XM_063601828.1 → XP_063457898.1  glycogenin-2 isoform X3

  4. XM_063601829.1 → XP_063457899.1  glycogenin-2 isoform X4

  5. XM_014343374.4 → XP_014198860.1  glycogenin-2 isoform X5

    Conserved Domains (1) summary
    cl11394
    Location:1 → 102
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  6. XM_003814388.5 → XP_003814436.1  glycogenin-2 isoform X1

    See identical proteins and their annotated locations for XP_003814436.1

    UniProtKB/TrEMBL
    A0A2R9CDM7, A0A2R9CGA2
    Related
    ENSPPAP00000040046.1
    Conserved Domains (1) summary
    cd02537
    Location:6 → 257
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  7. XM_055106326.1 → XP_054962301.1  glycogenin-2 isoform X3

  8. XM_008967031.4 → XP_008965279.1  glycogenin-2 isoform X2

    UniProtKB/TrEMBL
    A0A2R9CGA2
    Conserved Domains (1) summary
    cd02537
    Location:6 → 257
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  9. XM_055106327.1 → XP_054962302.1  glycogenin-2 isoform X4

  10. XM_055106328.1 → XP_054962303.1  glycogenin-2 isoform X4

  11. XM_014343375.4 → XP_014198861.1  glycogenin-2 isoform X5

    Conserved Domains (1) summary
    cl11394
    Location:1 → 102
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  12. XM_014343376.3 → XP_014198862.1  glycogenin-2 isoform X5

    Conserved Domains (1) summary
    cl11394
    Location:1 → 102
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
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