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HS6ST1 heparan sulfate 6-O-sulfotransferase 1 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100995830, updated on 8-Mar-2024

Summary

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Gene symbol
HS6ST1
Gene description
heparan sulfate 6-O-sulfotransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See HS6ST1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 13 NC_073262.2 (47317982..47374840)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 2B NC_073251.1 (47332967..47389816)

Chromosome 13 - NC_073262.2Genomic Context describing neighboring genes Neighboring gene iron-sulfur cluster assembly 1 homolog, mitochondrial-like Neighboring gene 5S ribosomal RNA Neighboring gene uncharacterized LOC129397258 Neighboring gene dynein light chain Tctex-type 3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan-sulfate 6-O-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073262.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    47317982..47374840
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034954203.3 → XP_034810094.1  heparan-sulfate 6-O-sulfotransferase 1

    Conserved Domains (1) summary
    pfam03567
    Location:85 → 350
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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