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CDS1 CDP-diacylglycerol synthase 1 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100993468, updated on 8-Mar-2024

Summary

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Gene symbol
CDS1
Gene description
CDP-diacylglycerol synthase 1
See related
Ensembl:ENSPPAG00000043704
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See CDS1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 3 NC_073252.2 (45377695..45465834, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 4 NC_073253.1 (45583939..45652498, complement)

Chromosome 3 - NC_073252.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117979958 Neighboring gene WD repeat and FYVE domain containing 3 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC129397590 Neighboring gene uncharacterized LOC117979959

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate cytidylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidate cytidylyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073252.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    45377695..45465834 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003832240.5 → XP_003832288.1  phosphatidate cytidylyltransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_003832288.1

    UniProtKB/TrEMBL
    A0A2R9CJV4
    Related
    ENSPPAP00000042234.1
    Conserved Domains (1) summary
    cl21502
    Location:123 → 457
    CTP_transf_1; Cytidylyltransferase family

  2. XM_008957627.4 → XP_008955875.1  phosphatidate cytidylyltransferase 1 isoform X2

    Conserved Domains (1) summary
    cl21502
    Location:123 → 434
    CTP_transf_1; Cytidylyltransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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