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COLGALT2 collagen beta(1-O)galactosyltransferase 2 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100992518, updated on 6-Jun-2024

Summary

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Gene symbol
COLGALT2
Gene description
collagen beta(1-O)galactosyltransferase 2
See related
Ensembl:ENSPPAG00000025172
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
GLT25D2
Orthologs
human mouse all
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Genomic context

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See COLGALT2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 1 NC_073249.2 (65681357..65790520)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 1 NC_073249.1 (65364526..65465417)

Chromosome 1 - NC_073249.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117976536 Neighboring gene tRNA splicing endonuclease subunit 15 Neighboring gene ral guanine nucleotide dissociation stimulator like 1 Neighboring gene uncharacterized LOC134730192 Neighboring gene transcription factor NF-E4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables procollagen galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
procollagen galactosyltransferase 2
Names
glycosyltransferase 25 domain containing 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073249.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    65681357..65790520
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063603554.1 → XP_063459624.1  procollagen galactosyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A2R8ZNI4

  2. XM_034942264.3 → XP_034798155.2  procollagen galactosyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A2R8ZNI4

  3. XM_034942269.3 → XP_034798160.1  procollagen galactosyltransferase 2 isoform X3

    UniProtKB/TrEMBL
    A0A2R8ZNI4
    Conserved Domains (1) summary
    cl01298
    Location:221 → 406
    Glyco_transf_25; Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis. The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of ...

  4. XM_034942275.3 → XP_034798166.1  procollagen galactosyltransferase 2 isoform X3

    UniProtKB/TrEMBL
    A0A2R8ZNI4
    Conserved Domains (1) summary
    cl01298
    Location:221 → 406
    Glyco_transf_25; Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis. The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of ...

  5. XM_063603560.1 → XP_063459630.1  procollagen galactosyltransferase 2 isoform X3

    UniProtKB/TrEMBL
    A0A2R8ZNI4
Nucleotide Protein
Heading Accession and Version

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