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GFRA1 GDNF family receptor alpha 1 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100992012, updated on 3-Apr-2024

Summary

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Gene symbol
GFRA1
Gene description
GDNF family receptor alpha 1
See related
Ensembl:ENSPPAG00000031625
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See GFRA1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 8 NC_073257.2 (127932626..128150100, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 10 NC_073259.1 (127937964..128154536, complement)

Chromosome 8 - NC_073257.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129393147 Neighboring gene attractin like 1 Neighboring gene small nuclear ribonucleoprotein G-like Neighboring gene coiled-coil domain containing 172

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDNF family receptor alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073257.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    127932626..128150100 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003825616.6 → XP_003825664.3  GDNF family receptor alpha-1 isoform X2

    UniProtKB/TrEMBL
    A0A2R9AIA1

  2. XM_003825617.5 → XP_003825665.3  GDNF family receptor alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A2R9AQD8

  3. XM_063607532.1 → XP_063463602.1  GDNF family receptor alpha-1 isoform X2

    UniProtKB/TrEMBL
    A0A2R9AIA1

  4. XM_057299006.2 → XP_057154989.1  GDNF family receptor alpha-1 isoform X2

    UniProtKB/TrEMBL
    A0A2R9AIA1

  5. XM_008950950.5 → XP_008949198.3  GDNF family receptor alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A2R9AQD8

  6. XM_034931568.3 → XP_034787459.2  GDNF family receptor alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A2R9AQD8

  7. XM_057299005.2 → XP_057154988.1  GDNF family receptor alpha-1 isoform X2

    UniProtKB/TrEMBL
    A0A2R9AIA1

  8. XM_008950949.5 → XP_008949197.3  GDNF family receptor alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A2R9AQD8

  9. XM_063607533.1 → XP_063463603.1  GDNF family receptor alpha-1 isoform X3

RNA

  1. XR_010113209.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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