U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ALKBH6 alkB homolog 6 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100991950, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ALKBH6
Gene description
alkB homolog 6
See related
Ensembl:ENSPPAG00000036802
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ALKBH6 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 20 NC_073269.2 (42010025..42015162, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 19 NC_073268.1 (43993666..43998802, complement)

Chromosome 20 - NC_073269.2Genomic Context describing neighboring genes Neighboring gene succinate dehydrogenase complex assembly factor 1 Neighboring gene spectrin repeat containing nuclear envelope family member 4 Neighboring gene CAP-Gly domain containing linker protein 3 Neighboring gene THAP domain containing 8 Neighboring gene WD repeat domain 62

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alpha-ketoglutarate-dependent dioxygenase alkB homolog 6
Names
alkB, alkylation repair homolog 6

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073269.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    42010025..42015162 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003816128.5 → XP_003816176.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1

    UniProtKB/TrEMBL
    A0A2R9BCU9
    Related
    ENSPPAP00000027473.1
    Conserved Domains (1) summary
    cl21496
    Location:52 → 252
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

  2. XM_063600185.1 → XP_063456255.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X3

  3. XM_003816129.5 → XP_003816177.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X2

    UniProtKB/TrEMBL
    A0A2R9BGS0
    Related
    ENSPPAP00000027471.1
    Conserved Domains (1) summary
    cl21496
    Location:23 → 224
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

  4. XM_055103058.2 → XP_054959033.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X4

  5. XM_034945053.3 → XP_034800944.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X2

    UniProtKB/TrEMBL
    A0A2R9BGS0
    Conserved Domains (1) summary
    cl21496
    Location:23 → 224
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

  6. XM_055103059.2 → XP_054959034.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X4

  7. XM_008969133.4 → XP_008967381.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X5

    See identical proteins and their annotated locations for XP_008967381.1

    UniProtKB/TrEMBL
    A0A2R9BCY6
    Conserved Domains (1) summary
    cl21496
    Location:52 → 143
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.