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POP1 POP1 homolog, ribonuclease P/MRP subunit [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100991865, updated on 10-Oct-2024

Summary

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Gene symbol
POP1
Gene description
POP1 homolog, ribonuclease P/MRP subunit
See related
Ensembl:ENSPPAG00000018410
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See POP1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 7 NC_073256.2 (115458813..115501190)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 8 NC_073257.1 (91000256..91042640)

Chromosome 7 - NC_073256.2Genomic Context describing neighboring genes Neighboring gene glutamate rich 5 Neighboring gene reactive intermediate imine deaminase A homolog Neighboring gene U6 spliceosomal RNA Neighboring gene NIPA like domain containing 2 Neighboring gene uncharacterized LOC117981466 Neighboring gene serine/threonine kinase 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in tRNA 5'-leader removal IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleolar ribonuclease P complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonuclease MRP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribonucleases P/MRP protein subunit POP1
Names
processing of precursor 1, ribonuclease P/MRP subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073256.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    115458813..115501190
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034966404.3 → XP_034822295.1  ribonucleases P/MRP protein subunit POP1 isoform X1

    UniProtKB/TrEMBL
    A0A2R8ZHB6
    Conserved Domains (2) summary
    pfam06978
    Location:107 → 257
    POP1; Ribonucleases P/MRP protein subunit POP1
    pfam08170
    Location:617 → 708
    POPLD; POPLD (NUC188) domain

  2. XM_063606443.1 → XP_063462513.1  ribonucleases P/MRP protein subunit POP1 isoform X1

  3. XM_063606444.1 → XP_063462514.1  ribonucleases P/MRP protein subunit POP1 isoform X2

  4. XM_034966405.3 → XP_034822296.1  ribonucleases P/MRP protein subunit POP1 isoform X3

    UniProtKB/TrEMBL
    A0A2R8ZHB6
    Conserved Domains (2) summary
    pfam06978
    Location:107 → 246
    POP1; Ribonucleases P/MRP protein subunit POP1
    pfam08170
    Location:525 → 616
    POPLD; POPLD (NUC188) domain
Nucleotide Protein
Heading Accession and Version

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