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TMTC4 transmembrane O-mannosyltransferase targeting cadherins 4 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100991268, updated on 8-Mar-2024

Summary

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Gene symbol
TMTC4
Gene description
transmembrane O-mannosyltransferase targeting cadherins 4
See related
Ensembl:ENSPPAG00000027591
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See TMTC4 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 14 NC_073263.2 (102128729..102198896, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 13 NC_073262.1 (100796197..100866331, complement)

Chromosome 14 - NC_073263.2Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein eL15-like Neighboring gene propionyl-CoA carboxylase subunit alpha Neighboring gene uncharacterized LOC134728810 Neighboring gene gamma-glutamylamine cyclotransferase Neighboring gene ADP-ribosylation factor 4-like Neighboring gene uncharacterized LOC134728811

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum unfolded protein response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase TMTC4
Names
transmembrane and tetratricopeptide repeat containing 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073263.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    102128729..102198896 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034936919.3 → XP_034792810.1  protein O-mannosyl-transferase TMTC4 isoform X4

    UniProtKB/TrEMBL
    A0A2R8ZUQ3
    Conserved Domains (3) summary
    COG0457
    Location:481 → 717
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:482 → 510
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:294 → 366
    DUF1736; Domain of unknown function (DUF1736)

  2. XM_034936918.3 → XP_034792809.1  protein O-mannosyl-transferase TMTC4 isoform X1

    UniProtKB/TrEMBL
    A0A2R8ZUQ3, A0A2R8ZUR7
    Conserved Domains (3) summary
    COG0457
    Location:500 → 760
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:501 → 529
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:313 → 385
    DUF1736; Domain of unknown function (DUF1736)

  3. XM_063595851.1 → XP_063451921.1  protein O-mannosyl-transferase TMTC4 isoform X3

  4. XM_063595850.1 → XP_063451920.1  protein O-mannosyl-transferase TMTC4 isoform X2

Nucleotide Protein
Heading Accession and Version

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