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MGAT5 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100989629, updated on 3-Apr-2024

Summary

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Gene symbol
MGAT5
Gene description
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase
See related
Ensembl:ENSPPAG00000032538
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See MGAT5 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 13 NC_073262.2 (40463767..40793973, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 2B NC_073251.1 (40478737..40808944, complement)

Chromosome 13 - NC_073262.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112439085 Neighboring gene cyclin T2 Neighboring gene aminocarboxymuconate semialdehyde decarboxylase Neighboring gene transmembrane protein 163 Neighboring gene epididymal secretory protein E3-beta-like Neighboring gene NCK associated protein 5 Neighboring gene uncharacterized LOC103786807 Neighboring gene G-protein coupled receptor 39 Neighboring gene LY6/PLAUR domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A
Names
mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073262.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    40463767..40793973 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034954099.3 → XP_034809990.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A2R9ANA9
    Conserved Domains (2) summary
    pfam15027
    Location:7 → 138
    DUF4525; Domain of unknown function (DUF4525)
    pfam15024
    Location:172 → 726
    Glyco_transf_18; Glycosyltransferase family 18

  2. XM_034954098.3 → XP_034809989.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A2R9ANA9
    Conserved Domains (2) summary
    pfam15027
    Location:7 → 138
    DUF4525; Domain of unknown function (DUF4525)
    pfam15024
    Location:172 → 726
    Glyco_transf_18; Glycosyltransferase family 18

  3. XM_063595173.1 → XP_063451243.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A2R9ANA9
Nucleotide Protein
Heading Accession and Version

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