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LCTL lactase like [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100988981, updated on 3-Apr-2024

Summary

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Gene symbol
LCTL
Gene description
lactase like
See related
Ensembl:ENSPPAG00000040836
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See LCTL in Genome Data Viewer
Location:
chromosome: 16
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 16 NC_073265.2 (55800681..55822374, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 15 NC_073264.1 (59973540..59993122, complement)

Chromosome 16 - NC_073265.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD16 Neighboring gene small nucleolar RNA SNORD18 Neighboring gene zwilch kinetochore protein Neighboring gene ribosomal protein L4 Neighboring gene SMAD family member 6 Neighboring gene mitochondrial proton/calcium exchanger protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactase-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073265.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    55800681..55822374 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063596743.1 → XP_063452813.1  lactase-like protein isoform X1

    UniProtKB/TrEMBL
    A0A2R9C2W1

  2. XM_055098208.2 → XP_054954183.1  lactase-like protein isoform X1

    UniProtKB/TrEMBL
    A0A2R9C2W1

  3. XM_055098211.2 → XP_054954186.1  lactase-like protein isoform X6

  4. XM_063596744.1 → XP_063452814.1  lactase-like protein isoform X2

  5. XM_034938993.3 → XP_034794884.1  lactase-like protein isoform X4

    Conserved Domains (1) summary
    cl23725
    Location:13 → 421
    Glyco_hydro; Glycosyl hydrolases

  6. XM_063596746.1 → XP_063452816.1  lactase-like protein isoform X6

  7. XM_055098210.2 → XP_054954185.1  lactase-like protein isoform X3

  8. XM_063596745.1 → XP_063452815.1  lactase-like protein isoform X5

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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