U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ALKBH7 alkB homolog 7 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100988913, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ALKBH7
Gene description
alkB homolog 7
See related
Ensembl:ENSPPAG00000028564
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ALKBH7 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 20 NC_073269.2 (10770082..10775706)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 19 NC_073268.1 (9999342..10001637)

Chromosome 20 - NC_073269.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134729592 Neighboring gene caseinolytic mitochondrial matrix peptidase proteolytic subunit Neighboring gene persephin Neighboring gene general transcription factor IIF subunit 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in DNA damage response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial
Names
alkB, alkylation repair homolog 7

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073269.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    10770082..10775706
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008972668.6 → XP_008970916.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_008970916.1

    Conserved Domains (1) summary
    cl21496
    Location:135 → 217
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

  2. XM_003819332.4 → XP_003819380.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial isoform X2

    See identical proteins and their annotated locations for XP_003819380.1

    UniProtKB/TrEMBL
    A0A2R9A4P4
    Related
    ENSPPAP00000010709.1
    Conserved Domains (1) summary
    cl21496
    Location:28 → 200
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

  3. XM_034944367.2 → XP_034800258.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial isoform X3

    Conserved Domains (1) summary
    cl21496
    Location:109 → 191
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.