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POC5 POC5 centriolar protein [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100988310, updated on 8-Mar-2024

Summary

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Gene symbol
POC5
Gene description
POC5 centriolar protein
See related
Ensembl:ENSPPAG00000037734
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See POC5 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 4 NC_073253.2 (39588724..39632327)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 5 NC_073254.1 (37742354..37789011)

Chromosome 4 - NC_073253.2Genomic Context describing neighboring genes Neighboring gene importin subunit alpha-8-like Neighboring gene ADP/ATP translocase 2-like Neighboring gene U6 spliceosomal RNA Neighboring gene ankyrin repeat and death domain containing 1B Neighboring gene DNA polymerase kappa Neighboring gene U7 small nuclear RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein POC5
Names
POC5 centriolar protein homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073253.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    39588724..39632327
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003810451.5 → XP_003810499.1  centrosomal protein POC5 isoform X1

    UniProtKB/TrEMBL
    A0A2R9BIF3
    Related
    ENSPPAP00000029440.1

  2. XM_034959929.3 → XP_034815820.1  centrosomal protein POC5 isoform X4

    Conserved Domains (1) summary
    PHA03247
    Location:403 → 496
    PHA03247; large tegument protein UL36; Provisional

  3. XM_008962813.4 → XP_008961061.1  centrosomal protein POC5 isoform X3

    UniProtKB/TrEMBL
    A0A2R9BLY7
    Related
    ENSPPAP00000029442.1
    Conserved Domains (1) summary
    PHA03247
    Location:403 → 452
    PHA03247; large tegument protein UL36; Provisional

  4. XM_055112311.3 → XP_054968286.1  centrosomal protein POC5 isoform X2

Nucleotide Protein
Heading Accession and Version

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