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ULBP1 UL16 binding protein 1 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100986963, updated on 8-Mar-2024

Summary

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Gene symbol
ULBP1
Gene description
UL16 binding protein 1
See related
Ensembl:ENSPPAG00000041468
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See ULBP1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 5 NC_073254.2 (170004951..170014501, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 6 NC_073255.1 (167865912..167882972)

Chromosome 5 - NC_073254.2Genomic Context describing neighboring genes Neighboring gene UL16-binding protein 1-like Neighboring gene transcription factor BTF3-like Neighboring gene retinoic acid early transcript 1L Neighboring gene prohibitin 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UL16-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073254.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    170004951..170014501 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008963905.5 → XP_008962153.1  UL16-binding protein 1 isoform X2

    Conserved Domains (1) summary
    cl08246
    Location:31 → 204
    MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2

  2. XM_034963080.3 → XP_034818971.1  UL16-binding protein 1 isoform X3

    Conserved Domains (1) summary
    cl08246
    Location:31 → 204
    MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2

  3. XM_003811512.7 → XP_003811560.1  UL16-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2R9CGR3
    Related
    ENSPPAP00000037392.1
    Conserved Domains (1) summary
    cl08246
    Location:31 → 204
    MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2

  4. XM_055114222.2 → XP_054970197.1  UL16-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2R9CGR3
Nucleotide Protein
Heading Accession and Version

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