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SCP2 sterol carrier protein 2 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100986541, updated on 10-Oct-2024

Summary

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Gene symbol
SCP2
Gene description
sterol carrier protein 2
See related
Ensembl:ENSPPAG00000042730
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See SCP2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 1 NC_073249.2 (173786509..173915204, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 1 NC_073249.1 (172927259..173057399, complement)

Chromosome 1 - NC_073249.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 1 member 7 Neighboring gene HIG1 domain family member 1A, mitochondrial-like Neighboring gene podocan Neighboring gene tubulin beta chain-like Neighboring gene histone H3.3A-like Neighboring gene ATP synthase subunit ATP5MJ, mitochondrial-like Neighboring gene translation machinery-associated protein 7-like Neighboring gene enoyl-CoA hydratase domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sterol carrier protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073249.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    173786509..173915204 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003815020.5 → XP_003815068.4  sterol carrier protein 2 isoform X1

  2. XM_063607511.1 → XP_063463581.1  sterol carrier protein 2 isoform X2

  3. XM_008967895.6 → XP_008966143.2  sterol carrier protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A2R9CE57
    Conserved Domains (1) summary
    PRK08256
    Location:12 → 361
    PRK08256; lipid-transfer protein; Provisional
Nucleotide Protein
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