U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GALE UDP-galactose-4-epimerase [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100986058, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
GALE
Gene description
UDP-galactose-4-epimerase
See related
Ensembl:ENSPPAG00000013178
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See GALE in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 1 NC_073249.2 (203140293..203145510)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 1 NC_073249.1 (202243277..202248475)

Chromosome 1 - NC_073249.2Genomic Context describing neighboring genes Neighboring gene alpha-L-fucosidase 1 Neighboring gene 3-hydroxy-3-methylglutaryl-CoA lyase Neighboring gene uncharacterized LOC117979867 Neighboring gene lysophospholipase 2 Neighboring gene PITH domain containing 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucose 4-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactose catabolic process via UDP-galactose IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
UDP-glucose 4-epimerase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073249.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    203140293..203145510
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008963121.3 → XP_008961369.1  UDP-glucose 4-epimerase isoform X1

    See identical proteins and their annotated locations for XP_008961369.1

    UniProtKB/TrEMBL
    A0A2R8ZDL9
    Conserved Domains (1) summary
    cd05247
    Location:4 → 338
    UDP_G4E_1_SDR_e; UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

  2. XM_008963125.3 → XP_008961373.1  UDP-glucose 4-epimerase isoform X2

    Conserved Domains (1) summary
    cd05247
    Location:4 → 312
    UDP_G4E_1_SDR_e; UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

  3. XM_008963126.2 → XP_008961374.1  UDP-glucose 4-epimerase isoform X3

    Conserved Domains (1) summary
    cd05247
    Location:2 → 274
    UDP_G4E_1_SDR_e; UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

  4. XM_008963122.5 → XP_008961370.1  UDP-glucose 4-epimerase isoform X1

    See identical proteins and their annotated locations for XP_008961370.1

    UniProtKB/TrEMBL
    A0A2R8ZDL9
    Related
    ENSPPAP00000003131.1
    Conserved Domains (1) summary
    cd05247
    Location:4 → 338
    UDP_G4E_1_SDR_e; UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

  5. XM_055096540.2 → XP_054952515.1  UDP-glucose 4-epimerase isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.