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ACSM5 acyl-CoA synthetase medium chain family member 5 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100984659, updated on 8-Mar-2024

Summary

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Gene symbol
ACSM5
Gene description
acyl-CoA synthetase medium chain family member 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See ACSM5 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 18 NC_073267.2 (21674412..21710286)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 16 NC_073265.1 (26194536..26225903)

Chromosome 18 - NC_073267.2Genomic Context describing neighboring genes Neighboring gene uromodulin Neighboring gene protein disulfide isomerase like, testis expressed Neighboring gene acyl-coenzyme A synthetase ACSM2A, mitochondrial Neighboring gene acyl-coenzyme A synthetase ACSM2B, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty-acyl-CoA synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl-coenzyme A synthetase ACSM5, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073267.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    21674412..21710286
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034939930.4 → XP_034795821.4  acyl-coenzyme A synthetase ACSM5, mitochondrial isoform X1

  2. XM_057299992.2 → XP_057155975.2  acyl-coenzyme A synthetase ACSM5, mitochondrial isoform X2

  3. XM_057299991.2 → XP_057155974.2  acyl-coenzyme A synthetase ACSM5, mitochondrial isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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