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ACAT1 acetyl-CoA acetyltransferase 1 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100984402, updated on 8-Mar-2024

Summary

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Gene symbol
ACAT1
Gene description
acetyl-CoA acetyltransferase 1
See related
Ensembl:ENSPPAG00000035088
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See ACAT1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 9 NC_073258.2 (108866381..108892867)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 11 NC_073260.1 (109959287..109985798)

Chromosome 9 - NC_073258.2Genomic Context describing neighboring genes Neighboring gene RAB39A, member RAS oncogene family Neighboring gene cullin 5 Neighboring gene protein NPAT Neighboring gene ATM serine/threonine kinase Neighboring gene chromosome 9 C11orf65 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetyl-CoA C-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetyl-CoA acetyltransferase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073258.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    108866381..108892867
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003828346.5 → XP_003828394.3  acetyl-CoA acetyltransferase, mitochondrial isoform X1

  2. XM_055094797.2 → XP_054950772.2  acetyl-CoA acetyltransferase, mitochondrial isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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